How Much Does It Cost to Run an Affiliate Program?

A realistic breakdown of affiliate program costs, including software, commissions, and hidden expenses to budget for.

·7 min read

Before launching an affiliate program, you need to understand the true cost. Beyond commission payments, there's software, management time, and often-overlooked expenses that affect your total investment.

This guide breaks down what running an affiliate program actually costs, so you can budget appropriately.

Cost Categories

Affiliate program costs fall into four categories:

  1. Software/Platform costs — The tools you use to run the program
  2. Commission costs — What you pay affiliates for referrals
  3. Operational costs — Time and resources to manage the program
  4. Hidden costs — Often-forgotten expenses

Let's examine each.

Software/Platform Costs

Purpose-Built Affiliate Software

Most SaaS companies use dedicated affiliate software:

PlatformStarting PriceNotes
PromoteKit$39/monthFlat fee, Stripe-native
Rewardful$49/monthSimple and straightforward
FirstPromoter$49/monthRevenue-based tiers
Tapfiliate$89/monthMore features, higher price
PartnerStack$500+/monthEnterprise-focused

Typical range: $40-200/month for small-to-medium programs.

Watch for:

  • Revenue caps requiring plan upgrades
  • Hidden fees for features you need

Affiliate Networks

If using networks like ShareASale or CJ Affiliate:

  • Setup fees: $0-500
  • Monthly minimums: $0-100
  • Transaction fees: 20-30% of commissions
  • Additional fees for features

Networks are generally more expensive than self-hosted software, but provide access to established affiliates.

Build vs. Buy

Building in-house tracking costs:

  • Development time: 80-200+ hours
  • Ongoing maintenance: 5-10 hours/month
  • Opportunity cost of not working on your product

For most companies, buying software is more cost-effective than building.

Software Cost Summary

Budget: $50-200/month for software

Annual: $600-2,400

Commission Costs

This is typically your largest expense.

Typical Commission Rates

Commission TypeTypical RateExample Cost
Recurring15-30%$20-30/month per $100/month customer
One-time (percentage)20-50% of first payment$20-50 per $100 first payment
One-time (flat)$50-200Fixed per customer

Calculating Commission Costs

Recurring commission example:

Your average customer:

  • Pays $100/month
  • Stays 24 months
  • LTV = $2,400

At 25% recurring commission:

  • Monthly commission: $25
  • Lifetime commission: $600
  • Commission as % of LTV: 25%

One-time commission example:

Same customer ($100/month, 24-month lifetime):

  • One-time commission: $100
  • Commission as % of LTV: 4.2%

Recurring is more expensive but often worth it for affiliate motivation.

What to Budget

Early program (Year 1): Commission costs are usually 5-15% of affiliate-generated revenue.

Mature program (Year 3+): As top affiliates earn higher tiers and your program grows, might reach 20-30% of affiliate revenue.

Example:

  • Affiliate revenue: $10,000/month
  • Commission rate: 25%
  • Commission cost: $2,500/month

Commission Cost Summary

Budget: 15-30% of affiliate-generated revenue

Not a net cost: You only pay when you earn revenue. $2,500 in commissions means $7,500+ in revenue you wouldn't otherwise have.

Operational Costs

Running a program takes time.

Program Management

Small program (< 50 affiliates):

  • 2-5 hours/week
  • Can be done by founder or marketing person

Medium program (50-200 affiliates):

  • 10-20 hours/week
  • Part-time dedicated person or significant time from existing staff

Large program (200+ affiliates):

  • Full-time affiliate manager
  • Support staff for affiliate inquiries

Tasks include:

  • Reviewing and approving applications
  • Answering affiliate questions
  • Creating and updating marketing materials
  • Monitoring for fraud or policy violations
  • Building relationships with top affiliates
  • Recruiting new affiliates
  • Processing payouts (if not automated)

Staff Cost Calculation

DIY (founder/existing staff):

  • No direct cost
  • Opportunity cost of your time

Part-time help:

  • Contractor: $25-75/hour
  • 10 hours/week = $1,000-3,000/month

Full-time affiliate manager:

  • $50,000-80,000/year salary
  • Plus benefits, overhead

Marketing Materials

Creating affiliate assets costs:

DIY:

  • Your time
  • Canva/basic tools: Free-$15/month

Professional:

  • Designer: $50-150/hour
  • Video production: $500-5,000
  • Copywriter: $50-200/hour

Initial asset creation: $500-5,000 depending on quality level Ongoing updates: $100-500/quarter

Operational Cost Summary

Small program: 5-10 hours/week of time, minimal cash Medium program: $1,000-3,000/month for dedicated help Large program: $5,000-8,000/month for full-time staff

Hidden Costs

Often overlooked but real expenses:

Payment Processing Fees

When you pay affiliates:

  • PayPal: 2-4% per transaction
  • Wire transfers: $20-50 per transfer
  • ACH: $0.50-1.00 per transfer

On $5,000/month in payouts:

  • PayPal fees: $100-200
  • ACH fees: $50-100
  • Bookkeeping for 1099/W-9 management
  • Legal review of affiliate terms
  • International tax complexity

Budget: $500-2,000/year for accounting/legal help

Fraud Losses

Despite best efforts, some fraud slips through:

  • Fake referrals paid before detection
  • Chargebacks from fraudulent customers
  • Commission clawbacks that can't be recovered

Budget: 1-3% of commission payments

Opportunity Cost

Time spent on affiliates is time not spent on:

  • Product development
  • Other marketing channels
  • Direct sales

This is real but hard to quantify.

Hidden Cost Summary

Budget: Add 10-15% to visible costs for hidden expenses

Total Cost Scenarios

Scenario 1: Small Bootstrap Program

Monthly costs:

  • Software: $39
  • Commissions (on $5,000 revenue): $1,250
  • Your time: 5 hours/week
  • Payment processing: $50
  • Total cash: ~$1,350/month
  • Net revenue: $3,650/month

Scenario 2: Growing Program

Monthly costs:

  • Software: $150
  • Commissions (on $25,000 revenue): $6,250
  • Part-time manager: $1,500
  • Marketing materials: $200
  • Payment processing: $200
  • Total cash: ~$8,300/month
  • Net revenue: $16,700/month

Scenario 3: Mature Program

Monthly costs:

  • Software: $300
  • Commissions (on $100,000 revenue): $25,000
  • Full-time manager: $6,000
  • Support staff: $2,000
  • Materials/tools: $500
  • Payment/admin: $1,000
  • Total cash: ~$34,800/month
  • Net revenue: $65,200/month

Is It Worth It?

ROI Calculation

Affiliate channel ROI:

ROI = (Revenue - Total Costs) / Total Costs × 100

Scenario 1 example:

  • Revenue: $5,000
  • Costs: $1,400
  • ROI = ($5,000 - $1,400) / $1,400 × 100 = 257%

Compare to other channels:

ChannelTypical CACNotes
Affiliate$200-400Pay for results
Google Ads$100-500+Pay regardless of conversion
Content marketingVariableLong time to results
Sales team$500-2,000Salaries + commission

When It's Worth It

Good economics:

  • LTV > 3x commission costs
  • Affiliate CAC < other channel CAC
  • Net profit from affiliate revenue is positive

Additional value:

  • Content created for you (SEO benefit)
  • Brand exposure you can't buy
  • Diversified acquisition channels

When to Reconsider

Warning signs:

  • Commission costs > 40% of revenue
  • Affiliate customers have significantly lower LTV
  • Program requires more management than value produced
  • Better ROI available in other channels

Budgeting Recommendations

Before Launch

One-time costs:

  • Legal review of terms: $500-2,000
  • Initial asset creation: $500-2,000
  • Software setup/training: Included or $0-500

First month budget: $2,000-5,000 (mostly one-time)

Monthly Operating Budget

Year 1 formula:

Monthly budget = Software + (Projected affiliate revenue × 0.30) + Time value

Example:

  • Software: $100
  • Projected revenue: $3,000
  • Commission reserve: $900
  • Your time (10 hours × $50): $500
  • Budget: $1,500/month

Scaling Budget

As program grows:

  • Commission costs scale with revenue (built into unit economics)
  • Software may need upgrades
  • Management time increases
  • Consider dedicated staff at $20,000+/month affiliate revenue

Cash Flow Consideration

Commission timing:

  • Revenue arrives: Day 0
  • Commission qualifies: Day 30-60
  • Payout: Day 45-75

You receive customer payments before paying commissions, creating positive cash flow timing.

Cost Optimization Tips

Software

  • Start with basic tier, upgrade as needed
  • Avoid percentage-of-payout fees if scaling
  • Use annual billing for discounts

Commissions

  • Set rates you can sustain long-term
  • Use tiered structures to reward performance without overpaying
  • Monitor affiliate customer LTV vs. commission costs

Operations

  • Automate everything possible (payouts, approvals, reporting)
  • Create thorough documentation to reduce support
  • Build templates for common tasks

Quality Over Quantity

  • Fewer, better affiliates cost less to manage
  • High-quality referrals justify commission costs
  • Fraud prevention saves money

Key Takeaways

  • Software costs: $50-200/month
  • Commission costs: 15-30% of affiliate-generated revenue
  • Operational costs: Varies with program size; budget time or money
  • Hidden costs: Add 10-15% buffer

The bottom line: A well-run affiliate program typically costs 25-40% of the revenue it generates. The remaining 60-75% is profitable revenue you wouldn't have otherwise.

When affiliate CAC is lower than alternatives and LTV is healthy, the program pays for itself many times over.

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